Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-655 in MPM Mesothelioma Gordon Cluster 64 Table contains all genes in the MPM Mesothelioma Gordon cluster number 64. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-655 51696 HECA headcase homolog (Drosophila) [Source:HGNC Symbol;Acc:21041] P T 8431 NR0B2 nuclear receptor subfamily 0, group B, member 2 [Source:HGNC Symbol;Acc:7961] zzz999 5105 PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) [Source:HGNC Symbol;Acc:8724] zzz999 7102 TSPAN7 tetraspanin 7 [Source:HGNC Symbol;Acc:11854] P T 10336 PCGF3 polycomb group ring finger 3 [Source:HGNC Symbol;Acc:10066] T 10286 BCAS2 breast carcinoma amplified sequence 2 [Source:HGNC Symbol;Acc:975] zzz999 29953 TRHDE thyrotropin-releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:30748] zzz999 10351 ABCA8 ATP-binding cassette, sub-family A (ABC1), member 8 [Source:HGNC Symbol;Acc:38] zzz999 347 APOD apolipoprotein D [Source:HGNC Symbol;Acc:612] zzz999 51759 C9orf78 chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:24932] zzz999 65109 UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) [Source:HGNC Symbol;Acc:20439] zzz999 283 ANG angiogenin, ribonuclease, RNase A family, 5 [Source:HGNC Symbol;Acc:483] zzz999 3667 IRS1 insulin receptor substrate 1 [Source:HGNC Symbol;Acc:6125] T 54819 ZCCHC10 zinc finger, CCHC domain containing 10 [Source:HGNC Symbol;Acc:25954] T 135948 OR2F2 olfactory receptor, family 2, subfamily F, member 2 [Source:HGNC Symbol;Acc:8247] zzz999 1842 ECM2 extracellular matrix protein 2, female organ and adipocyte specific [Source:HGNC Symbol;Acc:3154] zzz999 60529 ALX4 ALX homeobox 4 [Source:HGNC Symbol;Acc:450] zzz999 116984 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:16924] T 3930 LBR lamin B receptor [Source:HGNC Symbol;Acc:6518] T 9890 zzz999 Lipid phosphate phosphatase-related protein type 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7Z2D5] T 56994 CHPT1 choline phosphotransferase 1 [Source:HGNC Symbol;Acc:17852] zzz999 60468 BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 [Source:HGNC Symbol;Acc:14078] zzz999 10324 KBTBD10 kelch repeat and BTB (POZ) domain containing 10 [Source:HGNC Symbol;Acc:16905] zzz999 150 ADRA2A adrenergic, alpha-2A-, receptor [Source:HGNC Symbol;Acc:281] zzz999 5229 PGGT1B protein geranylgeranyltransferase type I, beta subunit [Source:HGNC Symbol;Acc:8895] zzz999 1960 EGR3 early growth response 3 [Source:HGNC Symbol;Acc:3240] zzz999 1805 DPT dermatopontin [Source:HGNC Symbol;Acc:3011] zzz999 9734 HDAC9 histone deacetylase 9 [Source:HGNC Symbol;Acc:14065] P T 8404 SPARCL1 SPARC-like 1 (hevin) [Source:HGNC Symbol;Acc:11220] T 8661 EIF3A eukaryotic translation initiation factor 3, subunit A [Source:HGNC Symbol;Acc:3271] P T 969 CD69 CD69 molecule [Source:HGNC Symbol;Acc:1694] zzz999 9411 ARHGAP29 Rho GTPase activating protein 29 [Source:HGNC Symbol;Acc:30207] T 23352 UBR4 ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:30313] zzz999 8243 SMC1A structural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:11111] zzz999 8462 KLF11 Kruppel-like factor 11 [Source:HGNC Symbol;Acc:11811] zzz999 79442 LRRC2 leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:14676] zzz999 4632 MYL1 myosin, light chain 1, alkali; skeletal, fast [Source:HGNC Symbol;Acc:7582] zzz999 10742 RAI2 retinoic acid induced 2 [Source:HGNC Symbol;Acc:9835] zzz999 8406 SRPX sushi-repeat containing protein, X-linked [Source:HGNC Symbol;Acc:11309] zzz999 10186 LHFP lipoma HMGIC fusion partner [Source:HGNC Symbol;Acc:6586] zzz999 54682 MANSC1 MANSC domain containing 1 [Source:HGNC Symbol;Acc:25505] zzz999 23351 KHNYN KH and NYN domain containing [Source:HGNC Symbol;Acc:20166] T 1959 EGR2 early growth response 2 [Source:HGNC Symbol;Acc:3239] P T 2139 EYA2 eyes absent homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:3520] zzz999 22884 WDR37 WD repeat domain 37 [Source:HGNC Symbol;Acc:31406] T 79630 C1orf54 chromosome 1 open reading frame 54 [Source:HGNC Symbol;Acc:26258] zzz999 958 CD40 CD40 molecule, TNF receptor superfamily member 5 [Source:HGNC Symbol;Acc:11919] T 4534 MTM1 myotubularin 1 [Source:HGNC Symbol;Acc:7448] P T 9467 SH3BP5 SH3-domain binding protein 5 (BTK-associated) [Source:HGNC Symbol;Acc:10827] T 2205 FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide [Source:HGNC Symbol;Acc:3609] zzz999 64131 XYLT1 xylosyltransferase I [Source:HGNC Symbol;Acc:15516] P T 255057 C19orf26 chromosome 19 open reading frame 26 [Source:HGNC Symbol;Acc:28617] zzz999 8605 PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent) [Source:HGNC Symbol;Acc:9037] zzz999 55024 BANK1 B-cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:18233] T 81578 COL21A1 collagen, type XXI, alpha 1 [Source:HGNC Symbol;Acc:17025] T 3350 HTR1A 5-hydroxytryptamine (serotonin) receptor 1A [Source:HGNC Symbol;Acc:5286] zzz999 6328 SCN3A sodium channel, voltage-gated, type III, alpha subunit [Source:HGNC Symbol;Acc:10590] T 911 CD1C CD1c molecule [Source:HGNC Symbol;Acc:1636] zzz999 79666 PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:HGNC Symbol;Acc:20757] zzz999 5326 PLAGL2 pleiomorphic adenoma gene-like 2 [Source:HGNC Symbol;Acc:9047] T 7248 TSC1 tuberous sclerosis 1 [Source:HGNC Symbol;Acc:12362] zzz999 2018 EMX2 empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:3341] zzz999 58494 JAM2 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:14686] zzz999 51585 PCF11 PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30097] zzz999 23175 LPIN1 lipin 1 [Source:HGNC Symbol;Acc:13345] T 79923 NANOG Nanog homeobox [Source:HGNC Symbol;Acc:20857] zzz999 262 AMD1 adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:457] zzz999 8529 CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2 [Source:HGNC Symbol;Acc:2645] zzz999 1675 CFD complement factor D (adipsin) [Source:HGNC Symbol;Acc:2771] zzz999 114884 OSBPL10 oxysterol binding protein-like 10 [Source:HGNC Symbol;Acc:16395] T 364 AQP7 aquaporin 7 [Source:HGNC Symbol;Acc:640] zzz999 10017 BCL2L10 BCL2-like 10 (apoptosis facilitator) [Source:HGNC Symbol;Acc:993] zzz999 5777 PTPN6 protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:9658] zzz999 4753 NELL2 NEL-like 2 (chicken) [Source:HGNC Symbol;Acc:7751] zzz999 9270 ITGB1BP1 integrin beta 1 binding protein 1 [Source:HGNC Symbol;Acc:23927] zzz999 29906 ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:HGNC Symbol;Acc:17827] zzz999 2138 EYA1 eyes absent homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3519] P T 5104 SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 [Source:HGNC Symbol;Acc:8723] zzz999 54762 GRAMD1C GRAM domain containing 1C [Source:HGNC Symbol;Acc:25252] zzz999 125058 TBC1D16 TBC1 domain family, member 16 [Source:HGNC Symbol;Acc:28356] zzz999 9899 SV2B synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:16874] T 6363 CCL19 chemokine (C-C motif) ligand 19 [Source:HGNC Symbol;Acc:10617] zzz999 6003 RGS13 regulator of G-protein signaling 13 [Source:HGNC Symbol;Acc:9995] T 10075 HUWE1 HECT, UBA and WWE domain containing 1 [Source:HGNC Symbol;Acc:30892] zzz999 51307 FAM53C family with sequence similarity 53, member C [Source:HGNC Symbol;Acc:1336] zzz999 9499 MYOT myotilin [Source:HGNC Symbol;Acc:12399] P T 11157 LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17017] zzz999 5175 PECAM1 platelet/endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:8823] T 5803 PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 [Source:HGNC Symbol;Acc:9685] zzz999 23411 SIRT1 sirtuin 1 [Source:HGNC Symbol;Acc:14929] T 11104 KATNA1 katanin p60 (ATPase containing) subunit A 1 [Source:HGNC Symbol;Acc:6216] zzz999 1399 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like [Source:HGNC Symbol;Acc:2363] T 9976 CLEC2B C-type lectin domain family 2, member B [Source:HGNC Symbol;Acc:2053] zzz999 7481 WNT11 wingless-type MMTV integration site family, member 11 [Source:HGNC Symbol;Acc:12776] zzz999 55776 C6orf64 chromosome 6 open reading frame 64 [Source:HGNC Symbol;Acc:21025] zzz999 116285 ACSM1 acyl-CoA synthetase medium-chain family member 1 [Source:HGNC Symbol;Acc:18049] zzz999 2823 GPM6A glycoprotein M6A [Source:HGNC Symbol;Acc:4460] T 90355 C5orf30 chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:25052] P T 23210 JMJD6 jumonji domain containing 6 [Source:HGNC Symbol;Acc:19355] zzz999

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